Cheese-Stuffed Soft Pretzel Bites Recipe (2025)

By Laura

Posted Sep 08, 2019, Updated Jul 01, 2021

5 from 4 votes

8 Comments

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Cheese-stuffed soft pretzel bites! In this recipe, homemade pretzel dough is wrapped around cheddar cheese, topped with sea salt and brushed with butter. Serve them as an appetizer, snack or on the side of your favorite bowl of soup.

Cheese-Stuffed Soft Pretzel Bites Recipe (2)

It’s the fall which means cozy sweaters, warm lattes, and cuddling up watching copious amounts of football. Over the years I have learned to enjoy actually watching the games, but mostly I’m just in it for the snacks.

It’s no secret that I’m mildly famous for my pretzel bread recipe, (LOL, but seriously) so I decided to take it up a notch by turning our favorite bread into cute little bites full of melty cheddar cheese!

These pretzel bites are fairly easy to make, and the results are out-of-this-world delicious and totally worth the time it takes! Plus they’re a great appetizer or side dish to serve to really “WOW” your guests!

Cheese-Stuffed Soft Pretzel Bites Recipe (3)

How to make pretzel bites

These cheese-stuffed pretzel bites are pretty straightforward, but I will walk through the process with you step-by-step to ensure your success!

Make the pretzel dough

Start this pretzel bites recipe by making the dough. It’s a, soft, pliable dough that turns out perfectly every single time. Check out this pretzel bread post for more detailed instructions, and don’t forget to watch the video. Here are a few tips:

  1. Make sure all of the ingredients are room temperature before mixing.
  2. Don’t add too much flour. The dough should be slightly tacky but still easy to work with.
  3. Using a standing mixer to mix and knead makes it really easy, but you can also do so by hand.
  4. You may put the dough in the bread machine set to the “dough cycle” for an even easier option.
  5. Let it rise only once, until it’s doubled in size.
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Divide dough into equal portions

I am terrible at eyeing things, so I rely on my food scale whenever I’m making dough recipes that require equal portions (like these dinner rolls and cinnamon rolls). It’s important that each pretzel bite is the same size so they bake evenly!

The weight of the entire recipe is around 800 grams, divided into 16 bites each one should be around 50 g. You can make more/smaller bites as well, just be sure to use enough dough to completely wrap the cheese on the inside!

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Add cheese

Cut the cheese into cubes, about 1/2″ to 1″ in size. Then form each portion of dough into a flat round discs large enough the fit the cheese cubes you cut!

Form into bites

This step is very important to ensure the cheese stays inside the pretzel bites and doesn’t leak out! Take the flat disc of dough and wrap it around the cheese. Pinch the seams together and roll the dough ball between your hands until it’s smooth.

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Boil in a baking soda & water bath

Just before you start rolling the pretzel bites, bring a pot of water to a boil. Once it’s boiling slowly add the baking soda. Be careful not to add it all at once, or the mixture will boil over and make a mess.

Boil the pretzel bites for 60 seconds, flip and boil 60 seconds more. Remove them with a slotted spoon, gently shaking off any excess water. Note: I use askimmer spoonlikethis to take the dough out of the boiling baking soda bath and remove excess water.

Top with salt

Transfer the boiled soft pretzel bites to a greased baking sheet. Immediately sprinkle them with coarse sea salt and bake. I like to bake them 8 at a time, so that they don’t have a chance to rise too much. There is nota second rise in this recipe, you do not want them to rise after the boiling process or else they will become fluffy instead of dense and chewy like a soft pretzel.

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Bake

Bake for 12-15 minutes, rotating the baking sheet once halfway through. The homemade pretzel bites are done when the outside is nicely browned.

Brush with melted butter

After baking immediately brush the soft pretzel bites with melted butter. Then transfer them to a wire rack to cool slightly.

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Serve!

These cheesy pretzel bites are best served warm, because you get that ooey gooey cheese factor. Here are some suggestions for serving:

  • Serve with a variety of dipping sauces: your favorite mustard variety, more cheese sauce, etc.
  • Plain! These soft pretzel bites taste amazing plain!
  • With your favorite chili (like this easy chili, or this slow cooker chicken chili) or soup (like this sausage kale soup). Dipping these beauties in some tomato soup will change your life.

Store

Store these soft pretzel bites in an airtight container at room temperature for 24 hours, or in the refrigerator for up to 5 days.

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FAQs about Pretzel Bites

Can pretzel dough be refrigerated?

Yes! you can refrigerate the pretzel bites dough in a bowl tightly covered with plastic wrap. The dough will rise a little bit in the fridge. When you are ready to bake, remove the dough from the fridge to let it complete its rise and come to room temperature, then proceed with the recipe.

How long can I keep pretzel dough in the fridge?

I recommend keeping the dough in the fridge for no more than 24 hours!

How is a pretzel different from bread?

A lot of people wonder how a soft pretzel is different from bread! The answer is that the dough is boiled before it is baked! Boiling the dough in thebaking soda & water bath is thestep in this recipe that gives this Homemade Pretzel Bread it’s pretzel-y identity!

Can I freeze pretzel bites?

Yes! These pretzel bites can be frozen in an airtight container for up to 2 months.

How do you reheat soft pretzel bites?

There are two ways to reheat this pretzel bites recipe:
In the microwave.Simply warm the pretzel bites in the microwave for 15 seconds if they have been kept at room temperature, 30 seconds if they have been stored in the refrigerator, and 60 seconds if they have been frozen.
In the oven.Preheat the oven to 25o degrees F. Place pretzel bites on a baking sheet or in a baking pan and cover with foil. Bake for 15-30 minutes until they are warmed through.

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Cheesy Pretzel Bites: Ingredients & Substitutions

As always I recommend making this pretzel bite recipe exactly as written, however here are a few possible substitutions and notes about ingredients!

  • Brown sugar.Both dark and light brown sugar work well in these soft pretzel bites! I use light brown sugar because it’s what I always have on hand! But dark brown sugar will add a little extra molasses flavor!
  • Milk. 2% milk can be used in place of whole milk! I do this often with great results! Half & half or cream also work well!
  • Butter.I use salted butter, but unsalted works just as well!
  • Sea salt.Please note that I always bake with pure sea salt. If you are using iodized table salt you may need to decrease the amount.
  • All-purpose flour.Bread flour is the only other flour I have used to make this recipe. I do not recommend making any other flour substitutions.
  • Cheddar cheese. For the best results use a high-quality cheddar cheese!
  • Coarse sea salt.This is a critical ingredient for the best tasting pretzel bread! One container of it has lasted me a very long time, and it’s totally worth buying (its not expensive) just to make these pretzel bites!
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Cheese-Stuffed Soft Pretzel Bites Recipe (12)

Cheese-Stuffed Soft Pretzel Bites Recipe (13)

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Cheese-Stuffed Pretzel Bites

Laura

This cheese-stuffed soft pretzel bites recipe is the best! Homemade pretzel dough is wrapped around cheddar cheese, topped with sea salt and brushed with butter. Serve them as an appetizer, snack or on the side of your favorite bowl of soup.

5 from 4 votes

Course Appetizer, bread, Side Dish

Cuisine American

Servings 16 pretzel bites

Calories 186

Prep Time20 minutes minutes

Cook Time15 minutes minutes

Rising time1 hour hour

Total Time1 hour hour 35 minutes minutes

Ingredients

Pretzel bites:

Water bath:

Topping:

Instructions

  • Combine yeast, water, and brown sugar in the bowl of a standing mixer fitted with the dough hook. Stir and let stand for 5 minutes (until foamy).

  • While yeast is proofing, melt butter in a microwave-safe bowl. Mix in milk and set aside.

  • Once yeast is proofed, add milk/butter to yeast mixture and mix on low speed with dough hook until just combined.

  • Add salt and flour and mix with dough hook until flour is fully incorporated.

  • Knead in a mixer until the dough forms a slightly tacky, but firm ball, you may need to add a little more flour 1 TBS at a time, but be careful, you want the dough to be a little tacky but not too sticky to handle.

  • Oil a large bowl, place the dough ball in the bowl, and cover with a damp towel in a warm place to let rise for one hour or until doubled in size.

  • After dough has doubled in size, preheat oven to 400 degrees F and grease a large baking pan, set aside.

  • Chop the cheese into 16, ½” cubes, set aside. (there will be extra cheese)

  • Remove the dough from the bowl and gently press out the air bubbles.

  • Make balls of dough the same size (NOTE: I recommend using a food scale to do this. The total weight of the dough comes out to be about 800 g, so each bite should weigh about 50 g).

  • Bring 4 quarts of water to a boil. When the water is boiling, slowly add the baking soda a little bit at a time (Be careful not to add too much at once or you will have a baking soda/water explosion)!

  • Form each dough portion into a round, flat disc. Add one piece of cheese onto each disc and form a ball around the cheese. Make sure to pinch of any seems and roll them into smooth balls so no cheese can leak out. (Do not let it rise at all here! Straight from forming the ball into the water). 
Complete with all 16 bites.

  • Drop one of the pretzel bites into the boiling baking soda water. Boil for 60 seconds on each side, turning it once to guarantee both sides are covered. Use a slotted spoon to drain the excess water from the dough and place it on the prepared baking sheet.

  • Immediately sprinkle coarse sea salt over the pretzel bites to your specific tastes.

  • Repeat with each pretzel bite until you have used them all. (Do NOT let it rise here, the bites need to go straight from the boiling water into the oven. I recommend baking 8 at a time, so they don’t have the opportunity to rise).

  • Bake the pretzel bites for 12-15 minutes, rotating the baking sheet once halfway through baking. The bites are done when they are browned and bounce back when touched.

  • Once removed from the oven, immediately brush the tops of the bites with melted butter. Transfer to a wire rack to cool just enough to enjoy!

Video

Notes

Store

Store these soft pretzel bites in an airtight container at room temperature for 24 hours, or in the refrigerator for up to 5 days.

Freeze

Freeze in an airtight container wrapped in plastic wrap for up to 2 months.

Ingredient Substitutions

  • Brown sugar.Both dark and light brown sugar work well in these soft pretzel bites! I use light brown sugar because it’s what I always have on hand! But dark brown sugar will add a little extra molasses flavor!
  • Milk. 2% milk can be used in place of whole milk! I do this often with great results! Half & half or cream also work well!
  • Butter.I use salted butter, but unsalted works just as well!
  • Sea salt.Please note that I always bake with pure sea salt. If you are using iodized table salt you may need to decrease the amount.
  • All-purpose flour.Bread flour is the only other flour I have used to make this recipe. I do not recommend making any other flour substitutions.
  • Cheddar cheese. For the best results use a high-quality cheddar cheese!
  • Coarse sea salt.This is a critical ingredient for the best tasting pretzel bread! One container of it has lasted me a very long time, and it’s totally worth buying (its not expensive) just to make these pretzel bites!

Nutrition

Serving: 1pretzel bite | Calories: 186kcal | Carbohydrates: 21g | Protein: 6g | Fat: 9g | Saturated Fat: 5g | Cholesterol: 25mg | Sodium: 1305mg | Potassium: 50mg | Fiber: 1g | Sugar: 2g | Vitamin A: 253IU | Calcium: 117mg | Iron: 1mg

Nutrition information is automatically calculated, so should only be used as an approximation.

Did you enjoy this recipe? Have a question? Leave a comment below!

This post contains affiliate links, which means that if you purchase aproduct through a link you clicked on here, I receive a portion of the sale.Thank you for supporting JoyFoodSunshine!

Cheese-Stuffed Soft Pretzel Bites Recipe (2025)

FAQs

How do you keep soft pretzel bites warm for a party? ›

A chafing dish keeps food warm with a more elaborate setup that includes a heat source, water pan, food pan, and cover. It's particularly effective for creating a moist environment that's ideal for keeping pretzels soft.

What's the difference between a pretzel and a soft pretzel? ›

Soft pretzels are large and have a chewy texture. They're usually served individually and are commonly sold at concession stands, restaurants, and bakeries. Meanwhile, hard pretzels are small and crunchy and can be eaten by the handful, depending on their shape.

How do you store soft pretzels so they don't get soggy? ›

Storing Freshly Baked Soft Pretzels

For those times when you have freshly baked soft pretzels, here's how to keep them tasting great: Cool Before Storage: Let pretzels cool completely to avoid moisture build-up. Individually Wrapped: Wrap each pretzel in plastic wrap to protect against dry air.

How do you make pretzel bites soft again? ›

Cover and store leftover pretzel bites at room temperature for up to 3 days. They lose a little softness over time. To reheat, microwave for a few seconds or bake in a 350°F (177°C) for 5 minutes.

Can I keep pretzel bites warm in a crockpot? ›

Keep warm – You can stack a good amount of pretzels in the slow cooker and the foil will help distribute the heat. Check them every once in a while and if they seem to be drying out, sprinkle a little water into the bottom of the slow cooker.

How to keep soft pretzels warm for a concession stand? ›

Use paper plate • Microwave each on paper plate for one minute OR BAKE in ROASTER, at 350 degrees, for 10 minutes. Pretzels can be wrapped in foil and stored in warm roaster oven.

What is the secret ingredient which makes a pretzel taste like a pretzel? ›

The answer lies in a brief dip in an alkaline water bath before baking. This bath essentially gelatinizes the outside of the pretzel, preventing it from fully “springing” during baking (as bread does) and giving pretzels their signature chewy crust. It also gives them their unique and indelible “pretzel” flavor.

Are soft pretzels junk food? ›

Pretzels may be better than some fatty chips, but four out of five nutrition experts surveyed by Time say if you're trying to eat healthy, pretzels shouldn't be your go-to snack. Although pretzels are low-fat, they are also pretty paltry on the protein and fiber front, and they can be quite high in sodium and carbs.

How do Germans eat soft pretzels? ›

In Bavaria's world-famous beer gardens, pretzels are also enjoyed with obatzda, a strong, cheesy dip made with butter, hot paprika, and Camembert. Frankfurt is home to a milder, creamier version known as schneegestöber, also enjoyed with pretzels and glasses of sour flat apple cider named apfelwein.

How do you make soft pretzels not stale? ›

First, note that open air and direct sunlight will quickly turn soft pretzels stale. To remedy this, once cooled, sprinkle some salt over the soft pretzels, then seal them in an airtight container at room temperature.

How to package soft pretzels? ›

Allow the pretzels to cool completely. We like to spread them out on cooling racks so that the tops stay dry and don't get wet from the salt. Once the pretzels are cool, place in zip top bags and suck out the air with a straw, or use a Foodsaver vacuum sealer which is my preferred method.

How do you make Auntie Anne's pretzels soft again? ›

Wrap pretzel in foil and bake for approximately 3 minutes. Or Microwave pretzel for approximately 10-15 seconds on medium setting. Repeat as necessary.

How do you get salt to stick to pretzel bites? ›

A: Simple. Wet your fingers and moisten the surface of the pretzel. Sprinkle salt immediately and it will stick. I put mine in a 375 degree oven for 6 to 8 minutes.

How do you keep homemade pretzel bites fresh? ›

Let pretzel bites cool completely. Place them on a baking sheet so they are not touching and freeze until solid, about 1 hour (this flash freezing prevents them from sticking to each other). Place in a large freezer bag or smaller plastic bags for individual servings. Freeze for up to 3 months.

How do you serve soft pretzels at a party? ›

Five Fun Ways to Serve Soft Pretzels with A Twist
  1. Pretzel Sandwiches. Transform your soft pretzels into delicious sandwiches. ...
  2. Pretzel Bites with Dips. Turn your soft pretzels into bite-sized treats perfect for dipping. ...
  3. Pretzel Nachos. ...
  4. Pretzel Pizzas. ...
  5. Dessert Pretzels.
Jun 14, 2024

How to warm pretzel bites? ›

Pretzel Instructions

If using microwave: Place pretzel bites on a microwave-safe plate. Microwave until heated through, about 15 seconds per every 10 bites. Bon appétit!

How long can pretzels stay in a pretzel warmer? ›

The Pretzel warmer does not cook the pretzels but simply keeps the pretzels from drying out for up to 8-10 hours.

How long will soft pretzels stay soft? ›

Even when stored properly, the pretzels will no longer be fresh after 1 to 2 days and may become spoiled and unsafe to eat thereafter.

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